Publications

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T
R. Minhas, Loeffler-Wirth, H., Siddiqui, Y. H., Obrębski, T., Vashisht, S., Nahia, K. Abu, Paterek, A., Brzozowska, A., Bugajski, L., Piwocka, K., Korzh, V., Binder, H., and Winata, C. Lanny, “Transcriptome profile of the sinoatrial ring reveals conserved and novel genetic programs of the zebrafish pacemaker.”, BMC Genomics, vol. 22, no. 1, p. 715, 2021.
M
M. Migdał, Tralle, E., Nahia, K. Abu, Bugajski, Ł., Kędzierska, K. Zofia, Garbicz, F., Piwocka, K., Winata, C. Lanny, and Pawlak, M., “Multi-omics analyses of early liver injury reveals cell-type-specific transcriptional and epigenomic shift.”, BMC Genomics, vol. 22, no. 1, p. 904, 2021.
D. Baranasic, Hörtenhuber, M., Balwierz, P. J., Zehnder, T., Mukarram, A. Kadir, Nepal, C., Várnai, C., Hadzhiev, Y., Jimenez-Gonzalez, A., Li, N., Wragg, J., D'Orazio, F. M., Relic, D., Pachkov, M., Díaz, N., Hernández-Rodríguez, B., Chen, Z., Stoiber, M., Dong, M., Stevens, I., Ross, S. E., Eagle, A., Martin, R., Obasaju, O., Rastegar, S., McGarvey, A. C., Kopp, W., Chambers, E., Wang, D., Kim, H. R., Acemel, R. D., Naranjo, S., Łapiński, M., Chong, V., Mathavan, S., Peers, B., Sauka-Spengler, T., Vingron, M., Carninci, P., Ohler, U., Lacadie, S. Allen, Burgess, S. M., Winata, C., van Eeden, F., Vaquerizas, J. M., Gómez-Skarmeta, J. Luis, Onichtchouk, D., Brown, B. James, Bogdanovic, O., van Nimwegen, E., Westerfield, M., Wardle, F. C., Daub, C. O., Lenhard, B., and Müller, F., “Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements.”, Nat Genet, vol. 54, no. 7, pp. 1037-1050, 2022.
D. Baranasic, Hörtenhuber, M., Balwierz, P. J., Zehnder, T., Mukarram, A. Kadir, Nepal, C., Várnai, C., Hadzhiev, Y., Jimenez-Gonzalez, A., Li, N., Wragg, J., D'Orazio, F. M., Relic, D., Pachkov, M., Díaz, N., Hernández-Rodríguez, B., Chen, Z., Stoiber, M., Dong, M., Stevens, I., Ross, S. E., Eagle, A., Martin, R., Obasaju, O., Rastegar, S., McGarvey, A. C., Kopp, W., Chambers, E., Wang, D., Kim, H. R., Acemel, R. D., Naranjo, S., Łapiński, M., Chong, V., Mathavan, S., Peers, B., Sauka-Spengler, T., Vingron, M., Carninci, P., Ohler, U., Lacadie, S. Allen, Burgess, S. M., Winata, C., van Eeden, F., Vaquerizas, J. M., Gómez-Skarmeta, J. Luis, Onichtchouk, D., Brown, B. James, Bogdanovic, O., van Nimwegen, E., Westerfield, M., Wardle, F. C., Daub, C. O., Lenhard, B., and Müller, F., “Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements.”, Nat Genet, vol. 54, no. 7, pp. 1037-1050, 2022.
G
K. Abu Nahia, Migdał, M., T Quinn, A., Poon, K. - L., Łapiński, M., Sulej, A., Liu, J., Mondal, S. S., Pawlak, M., Bugajski, Ł., Piwocka, K., Brand, T., Kohl, P., Korzh, V., and Winata, C., “Genomic and physiological analyses of the zebrafish atrioventricular canal reveal molecular building blocks of the secondary pacemaker region.”, Cell Mol Life Sci, vol. 78, no. 19-20, pp. 6669-6687, 2021.
D
M. Pawlak, Kedzierska, K. Z., Migdal, M., Nahia, K. Abu, Ramilowski, J. A., Bugajski, L., Hashimoto, K., Marconi, A., Piwocka, K., Carninci, P., and Winata, C. L., “Dynamics of cardiomyocyte transcriptome and chromatin landscape demarcates key events of heart development.”, Genome Res, vol. 29, no. 3, pp. 506-519, 2019.
M. Pawlak, Niescierowicz, K., and Winata, C. L., “Decoding the Heart through Next Generation Sequencing Approaches”, Genes (Basel), vol. 9, 2018.
C
C. L. Winata, Łapiński, M., Pryszcz, L., Vaz, C., Bin Ismail, M. H., Nama, S., Hajan, H. S., Lee, S. G. P., Korzh, V., Sampath, P., Tanavde, V., and Mathavan, S., “Cytoplasmic polyadenylation-mediated translational control of maternal mRNAs directs maternal-to-zygotic transition”, Development, vol. 145, 2018.
V. V. Balatskyi, Vaskivskyi, V. O., Myronova, A., Avramets, D., Nahia, K. Abu, Macewicz, L. L., Ruban, T. P., Kucherenko, D. 'yaYu, Soldatkin, O. O., Lushnikova, I. V., Skibo, G. G., Winata, C. L., Dobrzyn, P., and Piven, O. O., “Cardiac-specific β-catenin deletion dysregulates energetic metabolism and mitochondrial function in perinatal cardiomyocytes.”, Mitochondrion, vol. 60, pp. 59-69, 2021.
A
K. Niescierowicz, Pryszcz, L., Navarrete, C., Tralle, E., Sulej, A., Nahia, K. Abu, Kasprzyk, M. Elżbieta, Misztal, K., Pateria, A., Pakuła, A., Bochtler, M., and Winata, C., “Adar-mediated A-to-I editing is required for embryonic patterning and innate immune response regulation in zebrafish.”, Nat Commun, vol. 13, no. 1, p. 5520, 2022.
K. Niescierowicz, Pryszcz, L., Navarrete, C., Tralle, E., Sulej, A., Nahia, K. Abu, Kasprzyk, M. Elżbieta, Misztal, K., Pateria, A., Pakuła, A., Bochtler, M., and Winata, C., “Adar-mediated A-to-I editing is required for embryonic patterning and innate immune response regulation in zebrafish.”, Nat Commun, vol. 13, no. 1, p. 5520, 2022.
K. Niescierowicz, Pryszcz, L., Navarrete, C., Tralle, E., Sulej, A., Nahia, K. Abu, Kasprzyk, M. Elżbieta, Misztal, K., Pateria, A., Pakuła, A., Bochtler, M., and Winata, C., “Adar-mediated A-to-I editing is required for embryonic patterning and innate immune response regulation in zebrafish.”, Nat Commun, vol. 13, no. 1, p. 5520, 2022.