Publications

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Journal Article
M. Migdał, Arakawa, T., Takizawa, S., Furuno, M., Suzuki, H., Arner, E., Winata, C. Lanny, and Kaczkowski, B., xcore: an R package for inference of gene expression regulators., BMC Bioinformatics, vol. 24, no. 1, p. 14, 2023.
S. Hong Lam, Winata, C. L., Tong, Y., Korzh, S., San Lim, W., Korzh, V., Spitsbergen, J., Mathavan, S., Miller, L. D., Liu, E. T., and Gong, Z., Transcriptome kinetics of arsenic-induced adaptive response in zebrafish liver., Physiol Genomics, vol. 27, no. 3, pp. 351-61, 2006.
T. Fricke, Smalakyte, D., Lapinski, M., Pateria, A., Weige, C., Pastor, M., Kolano, A., Winata, C., Siksnys, V., Tamulaitis, G., and Bochtler, M., Targeted RNA Knockdown by a Type III CRISPR-Cas Complex in Zebrafish., CRISPR J, vol. 3, no. 4, pp. 299-313, 2020.
M. Migdał, Tralle, E., Nahia, K. Abu, Bugajski, Ł., Kędzierska, K. Zofia, Garbicz, F., Piwocka, K., Winata, C. Lanny, and Pawlak, M., Multi-omics analyses of early liver injury reveals cell-type-specific transcriptional and epigenomic shift., BMC Genomics, vol. 22, no. 1, p. 904, 2021.
K. Hana Utami, Winata, C. L., Hillmer, A. M., Aksoy, I., Long, H. Truong, Liany, H., G Y Chew, E., Mathavan, S., Tay, S. K. H., Korzh, V., Sarda, P., Davila, S., and Cacheux, V., Impaired development of neural-crest cell-derived organs and intellectual disability caused by MED13L haploinsufficiency., Hum Mutat, vol. 35, no. 11, pp. 1311-20, 2014.
H. Tan, Onichtchouk, D., and Winata, C., DANIO-CODE: Toward an Encyclopedia of DNA Elements in Zebrafish., Zebrafish, vol. 13, no. 1, pp. 54-60, 2016.
C. L. Winata, Łapiński, M., Pryszcz, L., Vaz, C., Bin Ismail, M. H., Nama, S., Hajan, H. S., Lee, S. G. P., Korzh, V., Sampath, P., Tanavde, V., and Mathavan, S., Cytoplasmic polyadenylation-mediated translational control of maternal mRNAs directs maternal-to-zygotic transition, Development, vol. 145, 2018.
K. Niescierowicz, Pryszcz, L., Navarrete, C., Tralle, E., Sulej, A., Nahia, K. Abu, Kasprzyk, M. Elżbieta, Misztal, K., Pateria, A., Pakuła, A., Bochtler, M., and Winata, C., Adar-mediated A-to-I editing is required for embryonic patterning and innate immune response regulation in zebrafish., Nat Commun, vol. 13, no. 1, p. 5520, 2022.