Publications

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2022

D. Baranasic, Hörtenhuber, M., Balwierz, P. J., Zehnder, T., Mukarram, A. Kadir, Nepal, C., Várnai, C., Hadzhiev, Y., Jimenez-Gonzalez, A., Li, N., Wragg, J., D'Orazio, F. M., Relic, D., Pachkov, M., Díaz, N., Hernández-Rodríguez, B., Chen, Z., Stoiber, M., Dong, M., Stevens, I., Ross, S. E., Eagle, A., Martin, R., Obasaju, O., Rastegar, S., McGarvey, A. C., Kopp, W., Chambers, E., Wang, D., Kim, H. R., Acemel, R. D., Naranjo, S., Łapiński, M., Chong, V., Mathavan, S., Peers, B., Sauka-Spengler, T., Vingron, M., Carninci, P., Ohler, U., Lacadie, S. Allen, Burgess, S. M., Winata, C., van Eeden, F., Vaquerizas, J. M., Gómez-Skarmeta, J. Luis, Onichtchouk, D., Brown, B. James, Bogdanovic, O., van Nimwegen, E., Westerfield, M., Wardle, F. C., Daub, C. O., Lenhard, B., and Müller, F., “Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements.”, Nat Genet, vol. 54, no. 7, pp. 1037-1050, 2022.

2021

M. Migdał, Tralle, E., Nahia, K. Abu, Bugajski, Ł., Kędzierska, K. Zofia, Garbicz, F., Piwocka, K., Winata, C. Lanny, and Pawlak, M., “Multi-omics analyses of early liver injury reveals cell-type-specific transcriptional and epigenomic shift.”, BMC Genomics, vol. 22, no. 1, p. 904, 2021.

2014

K. Hana Utami, Winata, C. L., Hillmer, A. M., Aksoy, I., Long, H. Truong, Liany, H., G Y Chew, E., Mathavan, S., Tay, S. K. H., Korzh, V., Sarda, P., Davila, S., and Cacheux, V., “Impaired development of neural-crest cell-derived organs and intellectual disability caused by MED13L haploinsufficiency.”, Hum Mutat, vol. 35, no. 11, pp. 1311-20, 2014.

2011

A. Yin, Korzh, S., Winata, C. L., Korzh, V., and Gong, Z., “Wnt signaling is required for early development of zebrafish swimbladder.”, PLoS One, vol. 6, no. 3, p. e18431, 2011.

H. Aanes, Winata, C. L., Lin, C. Ho, Chen, J. P., Srinivasan, K. G., Lee, S. G. P., Lim, A. Y. M., Hajan, H. Shreen, Collas, P., Bourque, G., Gong, Z., Korzh, V., Aleström, P., and Mathavan, S., “Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition.”, Genome Res, vol. 21, no. 8, pp. 1328-38, 2011.

S. Korzh, Winata, C. Lanni, Zheng, W., Yang, S., Yin, A., Ingham, P., Korzh, V., and Gong, Z., “The interaction of epithelial Ihha and mesenchymal Fgf10 in zebrafish esophageal and swimbladder development.”, Dev Biol, vol. 359, no. 2, pp. 262-76, 2011.

2010

A. Yin, Winata, C. L., Korzh, S., Korzh, V., and Gong, Z., “Expression of components of Wnt and Hedgehog pathways in different tissue layers during lung development in Xenopus laevis.”, Gene Expr Patterns, vol. 10, no. 7-8, pp. 338-44, 2010.

C. Yong Ung, Lam, S. Hong, Hlaing, M. Myintzu, Winata, C. L., Korzh, S., Mathavan, S., and Gong, Z., “Mercury-induced hepatotoxicity in zebrafish: in vivo mechanistic insights from transcriptome analysis, phenotype anchoring and targeted gene expression validation.”, BMC Genomics, vol. 11, p. 212, 2010.

C. L. Winata, Korzh, S., Kondrychyn, I., Korzh, V., and Gong, Z., “The role of vasculature and blood circulation in zebrafish swimbladder development.”, BMC Dev Biol, vol. 10, p. 3, 2010.

2009

C. L. Winata, Korzh, S., Kondrychyn, I., Zheng, W., Korzh, V., and Gong, Z., “Development of zebrafish swimbladder: The requirement of Hedgehog signaling in specification and organization of the three tissue layers.”, Dev Biol, vol. 331, no. 2, pp. 222-36, 2009.

2008

S. Korzh, Pan, X., Garcia-Lecea, M., Winata, C. L., Pan, X., Wohland, T., Korzh, V., and Gong, Z., “Requirement of vasculogenesis and blood circulation in late stages of liver growth in zebrafish.”, BMC Dev Biol, vol. 8, p. 84, 2008.

S. Korzh, Pan, X., Garcia-Lecea, M., Winata, C. L., Pan, X., Wohland, T., Korzh, V., and Gong, Z., “Requirement of vasculogenesis and blood circulation in late stages of liver growth in zebrafish.”, BMC Dev Biol, vol. 8, p. 84, 2008.

2006

S. Hong Lam, Winata, C. L., Tong, Y., Korzh, S., San Lim, W., Korzh, V., Spitsbergen, J., Mathavan, S., Miller, L. D., Liu, E. T., and Gong, Z., “Transcriptome kinetics of arsenic-induced adaptive response in zebrafish liver.”, Physiol Genomics, vol. 27, no. 3, pp. 351-61, 2006.