Journal Article
M. Migdał, Arakawa, T., Takizawa, S., Furuno, M., Suzuki, H., Arner, E., Winata, C. Lanny, and Kaczkowski, B.,
“xcore: an R package for inference of gene expression regulators.”,
BMC Bioinformatics, vol. 24, no. 1, p. 14, 2023.
C. L. Winata, Korzh, S., Kondrychyn, I., Korzh, V., and Gong, Z.,
“The role of vasculature and blood circulation in zebrafish swimbladder development.”,
BMC Dev Biol, vol. 10, p. 3, 2010.
C. L. Winata, Korzh, S., Kondrychyn, I., Korzh, V., and Gong, Z.,
“The role of vasculature and blood circulation in zebrafish swimbladder development.”,
BMC Dev Biol, vol. 10, p. 3, 2010.
C. L. Winata, Korzh, S., Kondrychyn, I., Korzh, V., and Gong, Z.,
“The role of vasculature and blood circulation in zebrafish swimbladder development.”,
BMC Dev Biol, vol. 10, p. 3, 2010.
R. Minhas, Paterek, A., Łapiński, M., Bazała, M., Korzh, V., and Winata, C. L.,
“A novel conserved enhancer at zebrafish zic3 and zic6 loci drives neural expression.”,
Dev Dyn, vol. 248, no. 9, pp. 837-849, 2019.
S. Korzh, Winata, C. Lanni, Zheng, W., Yang, S., Yin, A., Ingham, P., Korzh, V., and Gong, Z.,
“The interaction of epithelial Ihha and mesenchymal Fgf10 in zebrafish esophageal and swimbladder development.”,
Dev Biol, vol. 359, no. 2, pp. 262-76, 2011.
S. Korzh, Winata, C. Lanni, Zheng, W., Yang, S., Yin, A., Ingham, P., Korzh, V., and Gong, Z.,
“The interaction of epithelial Ihha and mesenchymal Fgf10 in zebrafish esophageal and swimbladder development.”,
Dev Biol, vol. 359, no. 2, pp. 262-76, 2011.
H. Aanes, Winata, C. L., Lin, C. Ho, Chen, J. P., Srinivasan, K. G., Lee, S. G. P., Lim, A. Y. M., Hajan, H. Shreen, Collas, P., Bourque, G., Gong, Z., Korzh, V., Aleström, P., and Mathavan, S.,
“Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition.”,
Genome Res, vol. 21, no. 8, pp. 1328-38, 2011.
A. Yin, Korzh, S., Winata, C. L., Korzh, V., and Gong, Z.,
“Wnt signaling is required for early development of zebrafish swimbladder.”,
PLoS One, vol. 6, no. 3, p. e18431, 2011.
A. Yin, Korzh, S., Winata, C. L., Korzh, V., and Gong, Z.,
“Wnt signaling is required for early development of zebrafish swimbladder.”,
PLoS One, vol. 6, no. 3, p. e18431, 2011.
R. Minhas, Loeffler-Wirth, H., Siddiqui, Y. H., Obrębski, T., Vashisht, S., Nahia, K. Abu, Paterek, A., Brzozowska, A., Bugajski, L., Piwocka, K., Korzh, V., Binder, H., and Winata, C. Lanny,
“Transcriptome profile of the sinoatrial ring reveals conserved and novel genetic programs of the zebrafish pacemaker.”,
BMC Genomics, vol. 22, no. 1, p. 715, 2021.
S. Hong Lam, Winata, C. L., Tong, Y., Korzh, S., San Lim, W., Korzh, V., Spitsbergen, J., Mathavan, S., Miller, L. D., Liu, E. T., and Gong, Z.,
“Transcriptome kinetics of arsenic-induced adaptive response in zebrafish liver.”,
Physiol Genomics, vol. 27, no. 3, pp. 351-61, 2006.
S. Hong Lam, Winata, C. L., Tong, Y., Korzh, S., San Lim, W., Korzh, V., Spitsbergen, J., Mathavan, S., Miller, L. D., Liu, E. T., and Gong, Z.,
“Transcriptome kinetics of arsenic-induced adaptive response in zebrafish liver.”,
Physiol Genomics, vol. 27, no. 3, pp. 351-61, 2006.
T. Fricke, Smalakyte, D., Lapinski, M., Pateria, A., Weige, C., Pastor, M., Kolano, A., Winata, C., Siksnys, V., Tamulaitis, G., and Bochtler, M.,
“Targeted RNA Knockdown by a Type III CRISPR-Cas Complex in Zebrafish.”,
CRISPR J, vol. 3, no. 4, pp. 299-313, 2020.
S. Korzh, Pan, X., Garcia-Lecea, M., Winata, C. L., Pan, X., Wohland, T., Korzh, V., and Gong, Z.,
“Requirement of vasculogenesis and blood circulation in late stages of liver growth in zebrafish.”,
BMC Dev Biol, vol. 8, p. 84, 2008.
S. Korzh, Pan, X., Garcia-Lecea, M., Winata, C. L., Pan, X., Wohland, T., Korzh, V., and Gong, Z.,
“Requirement of vasculogenesis and blood circulation in late stages of liver growth in zebrafish.”,
BMC Dev Biol, vol. 8, p. 84, 2008.
B. Uszczynska-Ratajczak, Sugunan, S., Kwiatkowska, M., Migdal, M., Carbonell-Sala, S., Sokol, A., Winata, C. L., and Chacinska, A.,
“Profiling subcellular localization of nuclear-encoded mitochondrial gene products in zebrafish.”,
Life Sci Alliance, vol. 6, no. 1, 2023.
M. Migdał, Tralle, E., Nahia, K. Abu, Bugajski, Ł., Kędzierska, K. Zofia, Garbicz, F., Piwocka, K., Winata, C. Lanny, and Pawlak, M.,
“Multi-omics analyses of early liver injury reveals cell-type-specific transcriptional and epigenomic shift.”,
BMC Genomics, vol. 22, no. 1, p. 904, 2021.
D. Baranasic, Hörtenhuber, M., Balwierz, P. J., Zehnder, T., Mukarram, A. Kadir, Nepal, C., Várnai, C., Hadzhiev, Y., Jimenez-Gonzalez, A., Li, N., Wragg, J., D'Orazio, F. M., Relic, D., Pachkov, M., Díaz, N., Hernández-Rodríguez, B., Chen, Z., Stoiber, M., Dong, M., Stevens, I., Ross, S. E., Eagle, A., Martin, R., Obasaju, O., Rastegar, S., McGarvey, A. C., Kopp, W., Chambers, E., Wang, D., Kim, H. R., Acemel, R. D., Naranjo, S., Łapiński, M., Chong, V., Mathavan, S., Peers, B., Sauka-Spengler, T., Vingron, M., Carninci, P., Ohler, U., Lacadie, S. Allen, Burgess, S. M., Winata, C., van Eeden, F., Vaquerizas, J. M., Gómez-Skarmeta, J. Luis, Onichtchouk, D., Brown, B. James, Bogdanovic, O., van Nimwegen, E., Westerfield, M., Wardle, F. C., Daub, C. O., Lenhard, B., and Müller, F.,
“Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements.”,
Nat Genet, vol. 54, no. 7, pp. 1037-1050, 2022.
D. Baranasic, Hörtenhuber, M., Balwierz, P. J., Zehnder, T., Mukarram, A. Kadir, Nepal, C., Várnai, C., Hadzhiev, Y., Jimenez-Gonzalez, A., Li, N., Wragg, J., D'Orazio, F. M., Relic, D., Pachkov, M., Díaz, N., Hernández-Rodríguez, B., Chen, Z., Stoiber, M., Dong, M., Stevens, I., Ross, S. E., Eagle, A., Martin, R., Obasaju, O., Rastegar, S., McGarvey, A. C., Kopp, W., Chambers, E., Wang, D., Kim, H. R., Acemel, R. D., Naranjo, S., Łapiński, M., Chong, V., Mathavan, S., Peers, B., Sauka-Spengler, T., Vingron, M., Carninci, P., Ohler, U., Lacadie, S. Allen, Burgess, S. M., Winata, C., van Eeden, F., Vaquerizas, J. M., Gómez-Skarmeta, J. Luis, Onichtchouk, D., Brown, B. James, Bogdanovic, O., van Nimwegen, E., Westerfield, M., Wardle, F. C., Daub, C. O., Lenhard, B., and Müller, F.,
“Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements.”,
Nat Genet, vol. 54, no. 7, pp. 1037-1050, 2022.
C. Yong Ung, Lam, S. Hong, Hlaing, M. Myintzu, Winata, C. L., Korzh, S., Mathavan, S., and Gong, Z.,
“Mercury-induced hepatotoxicity in zebrafish: in vivo mechanistic insights from transcriptome analysis, phenotype anchoring and targeted gene expression validation.”,
BMC Genomics, vol. 11, p. 212, 2010.
K. Hana Utami, Winata, C. L., Hillmer, A. M., Aksoy, I., Long, H. Truong, Liany, H., G Y Chew, E., Mathavan, S., Tay, S. K. H., Korzh, V., Sarda, P., Davila, S., and Cacheux, V.,
“Impaired development of neural-crest cell-derived organs and intellectual disability caused by MED13L haploinsufficiency.”,
Hum Mutat, vol. 35, no. 11, pp. 1311-20, 2014.
K. Abu Nahia, Migdał, M., T Quinn, A., Poon, K. - L., Łapiński, M., Sulej, A., Liu, J., Mondal, S. S., Pawlak, M., Bugajski, Ł., Piwocka, K., Brand, T., Kohl, P., Korzh, V., and Winata, C.,
“Genomic and physiological analyses of the zebrafish atrioventricular canal reveal molecular building blocks of the secondary pacemaker region.”,
Cell Mol Life Sci, vol. 78, no. 19-20, pp. 6669-6687, 2021.
K. Abu Nahia, Migdał, M., T Quinn, A., Poon, K. - L., Łapiński, M., Sulej, A., Liu, J., Mondal, S. S., Pawlak, M., Bugajski, Ł., Piwocka, K., Brand, T., Kohl, P., Korzh, V., and Winata, C.,
“Genomic and physiological analyses of the zebrafish atrioventricular canal reveal molecular building blocks of the secondary pacemaker region.”,
Cell Mol Life Sci, vol. 78, no. 19-20, pp. 6669-6687, 2021.
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