Publications

Export 35 results:
Author Title Type [ Year(Desc)]
2006
S. Hong Lam, Winata, C. L., Tong, Y., Korzh, S., San Lim, W., Korzh, V., Spitsbergen, J., Mathavan, S., Miller, L. D., Liu, E. T., and Gong, Z., “Transcriptome kinetics of arsenic-induced adaptive response in zebrafish liver.”, Physiol Genomics, vol. 27, no. 3, pp. 351-61, 2006.
2008
S. Korzh, Pan, X., Garcia-Lecea, M., Winata, C. L., Pan, X., Wohland, T., Korzh, V., and Gong, Z., “Requirement of vasculogenesis and blood circulation in late stages of liver growth in zebrafish.”, BMC Dev Biol, vol. 8, p. 84, 2008.
2009
C. L. Winata, Korzh, S., Kondrychyn, I., Zheng, W., Korzh, V., and Gong, Z., “Development of zebrafish swimbladder: The requirement of Hedgehog signaling in specification and organization of the three tissue layers.”, Dev Biol, vol. 331, no. 2, pp. 222-36, 2009.
2010
L. C. Lindeman, Winata, C. L., Aanes, H., Mathavan, S., Alestrom, P., and Collas, P., “Chromatin states of developmentally-regulated genes revealed by DNA and histone methylation patterns in zebrafish embryos.”, Int J Dev Biol, vol. 54, no. 5, pp. 803-13, 2010.
A. Yin, Winata, C. L., Korzh, S., Korzh, V., and Gong, Z., “Expression of components of Wnt and Hedgehog pathways in different tissue layers during lung development in Xenopus laevis.”, Gene Expr Patterns, vol. 10, no. 7-8, pp. 338-44, 2010.
C. Yong Ung, Lam, S. Hong, Hlaing, M. Myintzu, Winata, C. L., Korzh, S., Mathavan, S., and Gong, Z., “Mercury-induced hepatotoxicity in zebrafish: in vivo mechanistic insights from transcriptome analysis, phenotype anchoring and targeted gene expression validation.”, BMC Genomics, vol. 11, p. 212, 2010.
C. L. Winata, Korzh, S., Kondrychyn, I., Korzh, V., and Gong, Z., “The role of vasculature and blood circulation in zebrafish swimbladder development.”, BMC Dev Biol, vol. 10, p. 3, 2010.
2011
L. C. Lindeman, Andersen, I. S., Reiner, A. H., Li, N., Aanes, H., Østrup, O., Winata, C. L., Mathavan, S., Müller, F., Aleström, P., and Collas, P., “Prepatterning of developmental gene expression by modified histones before zygotic genome activation.”, Dev Cell, vol. 21, no. 6, pp. 993-1004, 2011.
A. Yin, Korzh, S., Winata, C. L., Korzh, V., and Gong, Z., “Wnt signaling is required for early development of zebrafish swimbladder.”, PLoS One, vol. 6, no. 3, p. e18431, 2011.
H. Aanes, Winata, C. L., Lin, C. Ho, Chen, J. P., Srinivasan, K. G., Lee, S. G. P., Lim, A. Y. M., Hajan, H. Shreen, Collas, P., Bourque, G., Gong, Z., Korzh, V., Aleström, P., and Mathavan, S., “Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition.”, Genome Res, vol. 21, no. 8, pp. 1328-38, 2011.
S. Korzh, Winata, C. Lanni, Zheng, W., Yang, S., Yin, A., Ingham, P., Korzh, V., and Gong, Z., “The interaction of epithelial Ihha and mesenchymal Fgf10 in zebrafish esophageal and swimbladder development.”, Dev Biol, vol. 359, no. 2, pp. 262-76, 2011.
2013
C. L. Winata, Kondrychyn, I., Kumar, V., Srinivasan, K. G., Orlov, Y., Ravishankar, A., Prabhakar, S., Stanton, L. W., Korzh, V., and Mathavan, S., “Genome wide analysis reveals Zic3 interaction with distal regulatory elements of stage specific developmental genes in zebrafish.”, PLoS Genet, vol. 9, no. 10, p. e1003852, 2013.
2014
K. Hana Utami, Winata, C. L., Hillmer, A. M., Aksoy, I., Long, H. Truong, Liany, H., G Y Chew, E., Mathavan, S., Tay, S. K. H., Korzh, V., Sarda, P., Davila, S., and Cacheux, V., “Impaired development of neural-crest cell-derived organs and intellectual disability caused by MED13L haploinsufficiency.”, Hum Mutat, vol. 35, no. 11, pp. 1311-20, 2014.
H. Aanes, Winata, C. L., Moen, L. F., Østrup, O., Mathavan, S., Collas, P., Rognes, T., and Aleström, P., “Normalization of RNA-sequencing data from samples with varying mRNA levels.”, PLoS One, vol. 9, no. 2, p. e89158, 2014.
2015
P. Kraus, Winata, C. L., and Lufkin, T., “BAC transgenic zebrafish for transcriptional promoter and enhancer studies.”, Methods Mol Biol, vol. 1227, pp. 245-58, 2015.
C. L. Winata, Kondrychyn, I., and Korzh, V., “Changing Faces of Transcriptional Regulation Reflected by Zic3”, Current Genomics, vol. 16, pp. 117-127, 2015.
2016
H. Tan, Onichtchouk, D., and Winata, C., “DANIO-CODE: Toward an Encyclopedia of DNA Elements in Zebrafish.”, Zebrafish, vol. 13, no. 1, pp. 54-60, 2016.
2017
O. O. Piven and Winata, C. L., “The canonical way to make a heart: β-catenin and plakoglobin in heart development and remodeling”, Exp. Biol. Med. (Maywood), vol. 242, pp. 1735–1745, 2017.
2018
C. L. Winata, Łapiński, M., Pryszcz, L., Vaz, C., Bin Ismail, M. H., Nama, S., Hajan, H. S., Lee, S. G. P., Korzh, V., Sampath, P., Tanavde, V., and Mathavan, S., “Cytoplasmic polyadenylation-mediated translational control of maternal mRNAs directs maternal-to-zygotic transition”, Development, vol. 145, 2018.
M. Pawlak, Niescierowicz, K., and Winata, C. L., “Decoding the Heart through Next Generation Sequencing Approaches”, Genes (Basel), vol. 9, 2018.
C. L. Winata and Korzh, V., “The translational regulation of maternal mRNAs in time and space”, FEBS Lett., 2018.
2019
M. Pawlak, Kedzierska, K. Z., Migdal, M., Nahia, K. Abu, Ramilowski, J. A., Bugajski, L., Hashimoto, K., Marconi, A., Piwocka, K., Carninci, P., and Winata, C. L., “Dynamics of cardiomyocyte transcriptome and chromatin landscape demarcates key events of heart development.”, Genome Res, vol. 29, no. 3, pp. 506-519, 2019.
R. Minhas, Paterek, A., Łapiński, M., Bazała, M., Korzh, V., and Winata, C. L., “A novel conserved enhancer at zebrafish zic3 and zic6 loci drives neural expression.”, Dev Dyn, vol. 248, no. 9, pp. 837-849, 2019.
2020
T. Fricke, Smalakyte, D., Lapinski, M., Pateria, A., Weige, C., Pastor, M., Kolano, A., Winata, C., Siksnys, V., Tamulaitis, G., and Bochtler, M., “Targeted RNA Knockdown by a Type III CRISPR-Cas Complex in Zebrafish.”, CRISPR J, vol. 3, no. 4, pp. 299-313, 2020.
C. Lanny Winata, Dodzian, J., and Bialek-Wyrzykowska, U., “The zebrafish as a model for developmental and biomedical research in Poland and beyond.”, Dev Biol, vol. 457, no. 2, pp. 167-168, 2020.

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